- Mass, O.A.; Wilson, C.K.; Barcenas,G.; Li, L.; Terpetschnig, E.A.; Obukhova, O.M.; Kolosova, O.S; Tatarets, A.L.; Yurke,B.; Knowlton, W.B.; Pensack, R.D.; Lee, J. The Influence of Hydrophobicity on Excitonic Coupling in DNA-Templated Indolenine Squaraine Dye Aggregates. J. Phys. Chem. C 2022, 126, 7, 3475–3488
- Roy, S.K.; Mass, O.A.; Kellis, D.L.; Wilson, C.K.; Hall, J.A.; Yurke, B.; Knowlton, W.B. Exciton delocalization and scaffold stability in bridged nucleotide-substituted, DNA duplex-templated cyanine aggregates. J. Phys. Chem. B 2021, 125, 50, 13670–13684
- Huff, J.S.; Turner, D.B.; Mass, O.A.; Patten, L.K.; Wilson, C.K.; Roy, S.; Barclay, M.S. Yurke, B.; Knowlton, W.B.; Davis, P.H.; Pensack, R.D. Excited-State Lifetimes of DNA-Templated Cyanine Dimer, Trimer, and Tetramer Aggregates: The Role of Exciton Delocalization, Dye Separation, and DNA Heterogeneity. J. Phys. Chem. B 2021,125, 10240-10259.
- Mass, O.A, Tuccinardi J; Woodbury L; Wolf C; Grantham B; Pu X; King M.D; Warner D.L; Jorcyk C.L; Warner L.R. Bioactive Recombinant Human Oncostatin M for NMR-based Screening in Drug Discovery. Scientific Reports, in revision (2021)
- Barcenas, G; A. Biaggne; O.A. Mass; C.K. Wilson; R.D. Pensack; J. Lee; W.B. Knowlton; B. Yurke; L. Li. First-principles study of substituent effects on a custom squaraine dye.ARC Advances, submitted (2021)
- Barclay, M.S; S.K. Roy; J.S. Huff; O.A. Mass; D.B. Turner; C.K. Wilson; D.L. Kellis; E. Terpetschnig; J. Lee; P.H. Davis; B. Yurke, WB Knowlton, and RD Pensack. Rotaxane rings promote oblique packing and extended excited-state lifetimes in DNA-templated squaraine dye aggregates. Commun Chem 2021, 4, 19. (2021).
- Mass, O.A.; Wilson, C.K.; Roy, S.K.; Barclay, M.S.; Patten, L.K.; Terpetschnig, E.; Lee, J.; Pensack, R.D.; Yurke, B.; Knowlton, W.B. Exciton Delocalization in Indolenine Squaraine Aggregates Templated by DNA Holliday Junction Scaffolds, J. Phys. Chem. B 2020. 124, 43, 9636-9647
- Lishchuk, A.; Kodali, G.; Mancini, J.A.; Broadbent, M.; Darroch, B.; Mass, O.A.; Nabok, A.; Dutton, P.L.; Hunter, C.N.; Torma, P.; Leggett, G.J. A Synthetic Biological Quantum Optical System. Nanoscale 2018, 10, 13064-13073.
- Warner, L.R.; Mass, O.; Lenn, N.D.; Grantham B.R.; Oxford, J.T. Growing and Handling of Bacterial Cultures Within a Shared Core Facility for Integrated Structural Biology Program. InTechOpen Book, 2018.
- Zhang, S.; Reddy, M.N.; Mass, O.; Kim, H.-J.; Hu, G.; Lindsey, J.S. Synthesis of Tailored Hydrodipyrrins and Their Examination in Directed Routes to Bacterichlorins and Tetradehydrocorrins. New J. Chem. 2017, 41, 11170–11189.
- Reddy, M. N.; Zhang, S.; Kim, H.-J.; Mass, O.; Masahiko, T.; Lindsey, J. S. Synthesis and Spectral Properties of meso-Arylbacteriochlorins, Including Insights into Essential Motifs of their Hydrodipyrrin Precursors. Molecules 2017, 22, 634–666.
- Kodali, G.; Mancini, J.A.; Solomon, L.A.; Episova, T.V.; Roach, N.; Hobbs, C.J.; Wagner, P.; Mass, O.; Aravindu, K.; Barnsley, J.E.; Gordon, K.C.; Officer, D.L.; Dutton, P.L.; Moser, C.C. Design and Engineering of Water-Soluble Light-Harvesting Protein Maquettes, Chemical Science, 2017, 8, 316–324.
- Tsargorodska, A.; Cartron, M. L.; Vasilev, C.; Kodali, G.; Mass, O. A.; Jeremy J. Baumberg, J. J.; Dutton, P. L.; Hunter, N. C.; Törmä, P.; Leggett, G. J. Strong Coupling of Localized Surface Plasmons to Excitons in Light-Harvesting Complexes. Nano Lett. 2016, 16, 6850–6856.
- .Liu, M.; Ptaszek, M.; Mass, O.; Minkler, D. F.; Sommer, D. R.; Bhaumik, J.; Lindsey, J. S. Regioselective beta-pyrrolic electrophilic substitution of hydrodipyrrin-dialkylboron complexes facilitates access to synthetic models for chlorophyll f. New J. Chem. 2014, 38, 1717–1730.
- Deans, R.M.; Mass, O.; Diers, James R.; Bocian, David F.; Lindsey, Jonathan S. Serendipitous synthetic entrée to tetradehydro analogues of cobalamins. New J. Chem. 2013, 37, 3964–3975.
- Aravindu, K.; Mass, O.; Vairaprakash, P.; Springer, J. W.; Yang, E.; Niedzwiedzki, D. M.; Kirmaier, C.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Amphiphilic chlorins and bacteriochlorins in micellar environment. Molecular design, de novo synthesis and photophysical properties. Chem. Sci. 2013, 4, 3459-3477.
- Springer, J. W.; Faries, K. M.; Diers, J. R.; Muthiah, C; Mass, O.; Kee, H. L.; Kirmaier, C.; Lindsey, J. S.; Bocian, D. F.; Holten D. Effects of substituents on synthetic analogs of chlorophylls. Part 3: the distinctive impact of auxochromes at the 7- versus 3-positions. Photochem. Photobiol. 2012, 88, 651–674.
- Mass, O.; Lindsey, J. S. J. A trans-AB-bacteriochlorin building block. J. Org. Chem. 2011, 76, 9478–9487.
- Mass, O.; Pandithavidana, D. R.; Ptaszek, M.; Santiago, K.; Springer, J. W.; Jiao, J. Y.; Tang, Q.; Kirmaier, C.; Bocian, D. F.; Holten, D.; Lindsey, J. S. De Novo synthesis and properties of analogues of the self-assembling chlorosomal bacteriochlorophylls. New J. Chem. 2011, 35, 2671–2690.
- Mass, O.; Taniguchi, M.; Ptaszek, M.; Springer, J. W.; Faries, K. M.; Diers, J. R.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Structural characteristics that make chlorophylls green: interplay of hydrocarbon skeleton and substituents. New J. Chem. 2011, 35, 76–88.
- Lindsey, J. S.; Mass, O.; Chih-Yuan, C. Tapping the near-infrared spectral region with bacteriochlorin arrays. New J. Chem. 2011, 35, 511–516.
- Taniguchi, M.; Mass, O.; Boyle, P. D.; Tang, Q.; Diers, J. R.; Bocian, D. F.; Holten, D.; Structural studies of sparsely substituted synthetic chlorins and phorbines establish benchmarks for changes in the ligand core and framework of chlorophyll macrocycles. J. Mol. Structure 2010, 979, 27–45.
- Mass, O.; Ptaszek, M.; Taniguchi, M.; Diers, J. R.; Kee, H. L.; Bocian, D. F.; Holten, D.; Lindsey, J. S. Synthesis and photochemical properties of 12-substituted versus 13-substituted chlorins. J. Org. Chem. 2009, 74, 5276–5289.
- Nazarova, A.; Ignatova, A.; Feofanov, A.; Karmakova, T; Pljutinskaya, A.; Mass, O.; Grin, M.; Yakubovskaya, R.; Mironov, A.; Maurizot, J.-C. 13,15-N-cycloimide derivatives of chlorin p6 with isonicotinyl substituent are photosensitizers targeted to lysosomes. Photochem. Photobiol. 2007, 6, 1184–1196.
Patent
Lindsey, J. S.; Mass, O. Routes to trans A,B-substituted bacteriochlorins.
U.S. Patent 9,365,722 (June 14, 2016)