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Julia Oxford, PhD

black and white Julia Oxford headshot

Lori and Duane Stueckle Endowed Chair
University Distinguished Professor
Director, Center of Biomedical Research Excellence in Matrix Biology
Director, Biomolecular Research Center

Year arrived at BSU: 2000

Email: joxford@boisestate.edu
Office: Science Building, Room 211

Mailing Address:
Department of Biological Science
Boise State University
1910 University Dr.
Boise, ID 83725-1515

About

Education

Doctor of Philosophy, Biochemistry and Biophysics – 1986
Washington State University, Pullman, WA
Dissertation: “Export of Protein in Escherichia coli”
Advisor: Prof. Linda L. Randall
Department of Biochemistry and Biophysics
Washington State University

Master of Sciences, Biochemistry and Biophysics – 1985
Washington State University, Pullman, WA

Bachelor of Arts, Chemistry and Biology (cum Laude) – 1981
Linfield College, McMinnville, OR

Research Publications and Funding

Research Publications

Refereed Publications — Citations: >3010; h-index: 28; i10 index: 50 1985 -2007 available upon request

* Student authors

  1. Gerritsen M,* Oxford JT, Frary M, Henderson J,* Hampikian JM. (2008) Immuno-SEM characterization of developing bovine Materials Science and Engineering: C, 28:341-346.
  2. Kahler R*, Yingst S,* Krawczak D*, Oxford J, and Westendorf (2008) Collagen 11a1 is indirectly activated by Lymphocyte Enhancer-binding factor 1 (Lef1) and negatively regulates osteoblast maturation. Matrix Biology, 27(4):330-8. PMCID: PMC2431459.
  3. Bowen KB,* Reimers AP,* Luman S,* Kronz JD, Fyffe WE, Oxford JT. (2008) Immunohistochemical localization of collagen type XI alpha 1 and alpha 2 chains in human colon Journal of Histochemistry and Cytochemistry, 56:275-283. PMCID: PMC2324180.
  4. Halsted KC,* Bowen KB,* Bond L, Jorcyk CJ, FyffeWE, Kronz JD, Oxford JT. (2008) Collagen XI α1 in normal and malignant breast tissue. Modern Pathology. 21:1246-54. PMC2586035.
  5. Takata T, Oxford JT, Demeler B*, and Lampi (2008) Deamidation destabilizes and triggers aggregation of a lens protein, A3-crystallin. Protein Science. 17:1565-75. PMCID: PMC2525517.
  6. Yingst S,* Cole J,* Warner L,* Bloxham K,* Brown R, Kenoyer L, Knowlton B, Oxford JRT. (2009) Characterization of Collagenous Matrix Assembly in a Chondrocyte Model Journal of Biomedical Materials Science, 90:247-55. PMC2842207.
  7. Toumpoulis IK, Oxford JT, Cowan DB, Anagnostopoulos CE, Rokkas CK, Chamogeorgakis TP, Angouras DC, Shemin RJ, Navab M, Ericsson M, Federman M, Levitsky S, McCully (2009) Differential expression of collagen type V and XI alpha-1 in human ascending thoracic aortic aneurysms. Ann Thorac Surg. 88:506-13. PMC2834780.
  8. Fang M,* Adams JS,* McMahan BL,* Brown RJ, Oxford JT. (2010) The expression patterns of minor fibrillar collagens during development in zebrafish. Gene Expr Patterns, Oct-Dec;10(7- 8):315-22. Epub 2010 Jul 18, PMC2956583.
  9. Gorski JP, Huffman NT, Chittur S, Midura RJ, Black C, Oxford J, Seidah (2011) Inhibition of SKI-1 proprotein convertase and caspase-3 blocks transcription of key extracellular matrix genes regulating osteoblastic mineralization. J Biol Chem. 286(3): 1836-49.
  10. Tawara K*, Oxford JT, Jorcyk (2011) Clinical significance of interleukin (IL)-6 in cancer metastasis to bone: potential of anti-IL-6 therapies. Cancer Management Research, 2011;3:177-89. Epub 2011 May 18. PMC3101113.
  11. Brown R, Mallory C*, McDougal OM, Oxford JT. (2011) Proteomic analysis of Col11a1-associated protein PROTEOMICS, 11(24):4660-76. PMC3463621.
  12. Mallory C,* McDougal OM, Oxford JT. (2011) Collagen Type XI alpha-1 Chain Amino Propeptide Structural Model and Glycosaminoglycan Interactions in Silico, in Proceedings of 2011 International Conference on Bioinformatics & Computational Biology (ISBN #: 1-60132-172- 4/CSREA), Editors: Hamid Arabnia and Quoc-Nam Tran, pp.: 632-635, Las Vegas, USA.
  13. McDougal OM, Mallory C,* Warner LR,* Oxford JT. (2011) Predicted structure and binding motifs of alpha 1 (XI) collagen. JBio, (GSTF International Journal of BioScience), 1:43-48.
  14. Fang M,* Jacob R,* McDougal O, Oxford JT., (2012) Minor fibrillar collagens, variable regions alternative splicing, intrinsic disorder, and tyrosine Protein Cell. Jun;3(6):419-33. PMC3484837.
  15. Shea KG, Jacobs JC,* Carey JL, Anderson AF. Oxford JT. (2013) Osteochondritis Dissecans Knee Histology Studies Have Variable Findings and Theories of Etiology, Clinical Orthopaedics and Related Research, Apr;471(4):1127-36.
  16. Berger JM,* Rohn TT, Oxford JT. (2013) Autism as the Early Closure of a Neuroplastic Critical Period Normally Seen in Adolescence. Biol Syst. August 20, 1. doi:10.4172/2329-6577.1000118.
  17. Bullock C,* Cornia N, Jacob R*, Remm A*, Peavey T*, Weekes K*, Mallory C*, Oxford JT, McDougal OM, Andersen (2013) DockoMatic 2.0: high throughput inverse virtual screening and homology modeling. J Chem Inf Model. Aug 26;53(8):2161-70. doi: 10.1021/ci400047w. Epub 2013 Aug 8. PMC3916141.
  18. McDougal OM, Cornia N, Sambasivarao SV, Remm A*, Mallory C*, Oxford JT, Maupin CM, Andersen (2014) Homology modeling and molecular docking for the science curriculum. Biochem Mol Biol Educ. Mar;42(2):179-82. doi: 10.1002/bmb.20767. Epub 2013 Dec 20. PubMed PMID: 24376157.
  19. Mikelonis D,* Jorcyk CL, Tawara K*, Oxford JT. (2014) Stüve-Wiedemann syndrome: LIFR and associated cytokines in clinical course and etiology. Orphanet J Rare Dis. Mar 12;9(1):34. doi: 10.1186/1750-1172-9-34. PMC3995696.
  20. Hughes AN,* Oxford JT. (2014) A lipid-rich gestational diet predisposes offspring to nonalcoholic fatty liver disease: a potential sequence of Hepatic Medicine: Evidence and Research. Mar 6; 6:15-23. PMC3953741.
  21. Bates JT*, Jacobs JC*, Jr, Shea KG, Oxford JT. (2014) Emerging genetic basis of osteochondritis dissecans. Sports Med. 33(2):199-220. PMC3976886.
  22. Jacobs JC* Jr, Shea KG, Oxford JT, Carey (2014) Fluoroquinolone use in a child associated with development of osteochondritis dissecans. BMJ Case Rep. Sep 16. pii: bcr2014204544. doi: 10.1136/bcr-2014-204544. PMC4166236.
  23. Mellor LF, Baker TL*, Brown RJ, Catlin LW*, Oxford JT. (2014) Optimal 3D culture of primary articular chondrocytes for use in the rotating wall vessel (2014) Aviat Space Environ Med. Aug;85(8):798-804. doi: 10.3357/ASEM.3905.2014. PMCID: PMC4207436.
  24. Ryan RE, Martin B*, Mellor L, Jacob RB*, Tawara K*, McDougal OM, Oxford JT, Jorcyk (2015) Oncostatin M binds to extracellular matrix in a bioactive conformation: implications for inflammation and metastasis. Cytokine. 2015 Mar;72(1):71-85.
  25. Goyden J*, Tawara K*, Hedeen D*, Willey JS, Oxford JT, Jorcyk (2015) The Effect of OSM on MS3T3-E1 Osteoblastic Cells in Simulated Microgravity with Radiation. PLoS One. 1;10(6):e0127230. doi: 10.1371/journal.pone.0127230. eCollection 2015.
  26. Pu X, Oxford J (2015) Proteomic analysis of tissue engineered cartilage. Cartilage Tissue Engineering; Methods in Molecular Biology. 1340:263-78. doi: 10.1007/978-1-4939-2938-2_19.
  27. Parker H*, Conway E*, Goldsberry J*, Jeffries S*, Price E*, Oxford JT. (2015) Genetic and Molecular Aspects of DiGeorge (2015) BIOS. Vol. 86(2): 109-117. doi: 10.1893/0005-3155-86.2.109.
  28. Hafez A*, Squires R*, Pedracini A*, Joshi A, Seegmiller RE, Oxford JT. (2015) Col11a1 Regulates Bone Microarchitecture during Embryonic J Dev Biol. 2015;3(4):158-176. Epub 2015 Dec 16. PMCID: PMC4711924.
  29. Lamb CL*, Cholico GN*, Perkins DE*, Fewkes MT*, Oxford JT, Lujan TJ, Morrill EE*, Mitchell (2016) Aryl Hydrocarbon Receptor Activation by TCDD Modulates Expression of Extracellular Matrix Remodeling Genes during Experimental Liver Fibrosis. Biomed Res Int. 2016;2016:5309328. Epub 2016 Sep 8. PMCID: PMC5031815.
  30. Oxford AE*, Jorcyk CL, Oxford JT. (2016) Neuropathies of Stüve-Wiedemann Syndrome due to mutations in leukemia inhibitory factor receptor (LIFR) gene. J Neurol Neuromedicine. 2016;1(7):37-44. PMCID:
  31. Hughes A*, Oxford AE*, Tawara K*, Jorcyk CL, Oxford JT. (2017) Endoplasmic Reticulum Stress and Unfolded Protein Response in Cartilage Pathophysiology; Contributing Factors to Apoptosis and Int J Mol Sci. 2017 Mar 20;18(3). pii: E665. doi: 10.3390/ ijms18030665. PMCID: PMC5372677.
  32. Robertson JC*, Jorcyk CL, Oxford JT. (2018) DICER1 Syndrome: DICER1 Mutations in Rare Cancers (Basel). 2018 May 15;10(5). pii: E143. doi: 10.3390/ cancers10050143. PMCID: PMC5977116.
  33. FrahsSM*, Oxford JT, Neumann EE*, Brown RJ, Keller-Peck CR, Pu X, Lujan (2018) Extracellular Matrix Expression and Production in Fibroblast-Collagen Gels: Towards an In Vitro Model for Ligament Wound Healing. Ann Biomed Eng. 2018 Jun 5. doi: 10.1007/s10439-018-2064-0. [Epub ahead of print] PubMed PMID: 29873012.
  34. Yocham KM*, Scott C, Fujimoto K* Brown R, Tanasse E*, Oxford JT, Lujan TJ, Estrada (2018)Mechanical Properties of Graphene Foam and Graphene Foam – Tissue Composites, Advanced Engineering Materials. 2018 DOI: 10.1002/adem.201800166.
  35. Frahs SM*, Reeck JC*, Yocham KM*, Frederiksen A, Fujimoto K*, Scott CM, Beard RS, Brown R, Lujan TJ, Solov’yov IA, Estrada D, Oxford JT. (2019) Prechondrogenic ATDC5 cell attachment and differentiation on graphene foam; modulation by surface functionalization with fibronectin. ACS Appl Mater Interfaces. Oct 22. doi: 10.1021/acsami.9b14670.
  36. Covert H*, Mellor LF, Wolf CL*, Ankenbrandt N*, Emathinger JM, Tawara K*, Oxford JT, Jorcyk CL. (2019) OSM-induced CD44 contributes to breast cancer metastatic potential through cell detachment but not epithelial-mesenchymal transition. Cancer Manag Res. Aug 15;11:7721-7737
  37. Touchstone H*, Bryd R, Loisate S, Thompson M, Kim S, Puranam K, Senthilnathan AN, Pu X, Beard R, Rubin J, Alwood J, Oxford JT, Uzer G. (2019) Recovery of stem cell proliferation by low intensity vibration under simulated microgravity requires LINC complex. NPJ Microgravity. May 15;5:11. doi: 10.1038/s41526-019-0072-5.
  38. Oxford JT, Reeck JC, Hardy MJ*. (2019) Extracellular Matrix in Development and Disease. Int J Mol Sci. Jan 8;20(1). pii: E205. doi: 10.3390/ijms20010205.
  39. Beard RS, Jr, Hoettels BA*, Meegan JE, Wertz TS*, Cha BJ, Yang X, Oxford JT, Wu MH, Yuan SY. (2020). AKT2 maintains brain endothelial claudin-5 expression and selective activation of IR/AKT2/FOXO1-signaling reverses barrier dysfunction. Journal of Cerebral Blood Flow and Metabolism., 40(2), 374–391.
  40. Mellor LF, Nordberg RC*, Huebner P, Mohiti-Asli M, Taylor MA, Efird W, Oxford JT, Spang JT, Shirwaiker RA, Loboa EG. (2020). Investigation of multiphasic 3D-bioplotted scaffolds for site-specific chondrogenic and osteogenic differentiation of human adipose-derived stem cells for osteochondral tissue engineering applications. Journal of Biomedical Materials Research. Part B, Applied Biomaterials. 108(5), 2017–2030.
  41. Cornell KA, Benfield K*, Berntsen T*, Clingerman J*, Croteau A*, Goering S*, Moyer D*, Provost M*, White A*, Plumlee D, Oxford JT, Browning J. (2020). A Cold Atmospheric Pressure Plasma Discharge Device Exerts Antimicrobial Effects. Int J Latest Trends Eng Technol. 2020;15(3):036‐
  42. Oxford JT, Cornell KA, Romero JJ, et al. (2020) Center of Biomedical Research Excellence in Matrix Biology: Building Research Infrastructure, Supporting Young Researchers, and Fostering Collaboration. Special Issue: Extracellular Matrix in Development and Disease 2.0 in Int J Mol Sci. 2020;21(6):2141. Published 2020 Mar 20. doi:10.3390/ ijms21062141.
  43. Tanikella AS*, Hardy MJ*, Frahs SM*, Cormier AG*, Gibbons KD*, Fitzpatrick CK, Oxford JT. Emerging Gene-Editing Modalities for Osteoarthritis. Int J Mol Sci. 2020 Aug 22;21(17):6046. doi: 10.3390/ijms21176046. PMID: 32842631; PMCID: PMC7504272.
  44. Hardy MJ*, Reeck JC*, Fang M*, Adams JS*, Oxford JT. Col11a1a Expression Is Required for Zebrafish Development. J Dev Biol. 2020 Aug 28;8(3):16. doi: 10.3390/jdb8030016. PMID: 32872105; PMCID: PMC7558312.
  45. Bas G*, Loisate S*, Hudon SF*, Woods K*, Hayden EJ, Pu X, Beard R, Oxford JT, Uzer G. Low Intensity Vibrations Augment Mesenchymal Stem Cell Proliferation and Differentiation Capacity during in vitro Expansion. Sci Rep. 2020 Jun 10;10(1):9369. doi: 10.1038/s41598-020-66055-0. PMID: 32523117; PMCID: PMC7286897.
  46. Oxford JT, Jorcyk CL. Students engage in primary literature in molecular biology techniques using an online journal club format. Biochem Mol Biol Educ. 2020 Oct 20. doi: 10.1002/bmb.21472. Epub ahead of print. PMID: 33080662.

Invited Lectures and Presentations: > 70 presentations from 1983 – present; available upon request Contributed papers and posters at professional meetings: > 250 conference papers and posters from 1990 to present; available upon request

Teaching

Undergraduate Courses

Boise State University

  • Biology/Materials Science/ Mechanical & Biomedical Engineering 477 Biomaterials Science
  • Biology 497 Biochemistry of Cell Signaling Biology 497 Introduction to Bioinformatics Biology 191 General Biology
  • Biology 493 Internship in Laboratory Research
  • Biology 451 Developmental Biology, lecture and laboratory
  • Biology 453 Advanced Developmental Biology
  • Biology 301 Cell Biology
  • Biology 202 General Zoology lecture and laboratory
  • Chem 405 Research in Chemistry
  • CID 200, 300, 400, 500 Vertically Integrated Projects –Plasma Medicine

Portland State University (adjunct professor)

  • Chemistry 450 Biochemistry, 1991-1994.
  • Chemistry 250 Nutrition, 1991.

Lewis and Clark College, Portland, Oregon (adjunct professor)

  • Chemistry 335 and 336, Biochemistry lecture and laboratory, 1992.